Frequently asked questions about Mindboggle

• Why Mindboggle?
  • Purpose
  • Motivation
  • History
• Why Apache?
• Why Python?
• How do we cite Mindboggle?
• How long does it take to run Mindboggle?
• What are the labels Mindboggle uses?
  • DKT cortical labeling protocol (31 labels)
  • Noncortex label numbers and names
  • Sulcus names from the DKT labeling protocol (callosal sulcus removed)
  • Lists of label pairs that define DKT sulcus boundaries
  • Regions bounded by sulcal fundi
  • Boundaries that will NEVER be derived by fundi
  • Possible ways to combine or eliminate regions (from Jason Tourville’s notes)
  • Footnotes
• How do I create and use a Singularity image rather than Docker?