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Frequently asked questions about Mindboggle¶

  • Why Mindboggle?
    • Purpose
    • Motivation
    • History
  • Why Apache?
  • Why Python?
  • How do we cite Mindboggle?
  • How long does it take to run Mindboggle?
  • What are the labels Mindboggle uses?
    • DKT cortical labeling protocol (31 labels)
    • Noncortex label numbers and names
    • Sulcus names from the DKT labeling protocol (callosal sulcus removed)
    • Lists of label pairs that define DKT sulcus boundaries
    • Regions bounded by sulcal fundi
    • Boundaries that will NEVER be derived by fundi
    • Possible ways to combine or eliminate regions (from Jason Tourville’s notes)
    • Footnotes
  • How do I create and use a Singularity image rather than Docker?

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